SMTL ID : 5cu0.2 (1 other biounit)

Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

monomer

Ligands

2 x 54R: N-(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)acetamide(Non-covalent)

54R.1: 14 residues within 4Å: Chain A: N.141, F.144, L.147, I.156, Y.159, M.160, I.163, P.182, H.183, V.185, M.186, I.187, M.244, M.248 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.144, A:L.147, A:I.156, A:Y.159, A:P.182, A:I.187 Hydrogen bonds: A:N.141, A:P.182, A:H.183 54R.2: 7 residues within 4Å: Chain A: Q.59, Y.62, I.92, K.125, D.126, T.131, A.133 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.92, A:I.92, A:D.126, A:A.133 Hydrogen bonds: A:Q.59

1 x 54G: 2-hydroxy-5-methylbenzoic acid(Non-covalent)

54G.3: 8 residues within 4Å: Chain A: V.76, V.89, K.91, I.118, F.136, M.186, I.197, D.198 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.76, A:V.89, A:I.118, A:F.136, A:I.197 Hydrogen bonds: A:D.198 Water bridges: A:W.199 Salt bridges: A:K.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Fusco, C. et al., A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066. Bioorg. Med. Chem. (2017)

Release Date

2016-11-30

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Casein kinase II subunit alpha

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