SMTL ID : 5mmf.1 (1 other biounit)

Crystal Structure of CK2alpha with Compound 7 bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x JMB: (3-chloranyl-4-phenyl-phenyl)methyl-propyl-azanium(Non-covalent)

JMB.1: 12 residues within 4Å: Chain A: N.141, L.147, L.151, Y.159, M.160, P.182, H.183, V.185, M.186, I.187, M.244, M.248 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.147, A:Y.159, A:V.185, A:V.185, A:I.187, A:M.248 Hydrogen bonds: A:P.182

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: K.91, I.118, F.136, I.197, D.198 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.136 Hydrogen bonds: A:D.198 Water bridges: A:W.199, A:W.199 Salt bridges: A:K.91 ACT.3: 3 residues within 4Å: Chain A: H.299, S.300, K.302 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.300 Salt bridges: A:H.299, A:K.302 ACT.4: 2 residues within 4Å: Chain A: Y.219, H.257 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.219 Salt bridges: A:H.257, A:H.259 ACT.5: 4 residues within 4Å: Chain A: R.103, R.178, L.201, N.212 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:N.212 Water bridges: A:R.178 Salt bridges: A:R.103, A:R.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Fusco, C. et al., A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066. Bioorg. Med. Chem. (2017)

Release Date

2017-05-24

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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