SMTL ID : 5dah.2 (2 other biounits)

Crystal structure of PZP domain of human AF10 protein fused with Histone H3 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

hetero-1-1-mer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.25, C.28, H.52, C.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.25, A:C.28, A:H.52, A:C.55 ZN.2: 4 residues within 4Å: Chain A: C.42, C.47, C.68, C.71 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:C.47, A:C.68, A:C.71 ZN.3: 4 residues within 4Å: Chain A: C.82, C.85, H.102, C.105 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.82, A:C.85, A:H.102, A:C.105 ZN.4: 4 residues within 4Å: Chain A: C.137, C.140, H.167, C.170 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.137, A:C.140, A:H.167, A:C.170 ZN.5: 4 residues within 4Å: Chain A: C.157, C.162, C.194, H.197 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.157, A:C.162, A:C.194, A:H.197

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 5 residues within 4Å: Chain A: G.144, R.145, E.146, S.147, K.148 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.144, A:S.147, A:K.148 Salt bridges: A:R.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, S. et al., The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79. Mol.Cell (2015)

Release Date

2015-10-21

Peptides

Protein AF-10: A
Histone H3 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Protein AF-10

Histone H3 peptide

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