SMTL ID : 5dlo.1

S. aureus MazF in complex with substrate analogue

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x DA- DU- DA- DC- DA- DU- DA: DNA substrate analogue AUACAUA(Non-covalent)

DA-DU-DA-DC-DA-DU-DA.1: 35 residues within 4Å: Chain A: L.22, G.30, S.31, E.32, Q.33, G.34, V.36, R.37, P.38, I.59, T.60, G.61, R.62, K.65, A.66, I.68, P.69, T.70, H.71, L.81, D.82, K.83, S.85, E.90, Q.91, E.102, L.104 Chain B: Q.43, N.44, T.46, G.47, Y.50, S.51, P.52, T.53 Protein-ligand interaction information (PLIP) not available DA-DU-DA-DC-DA-DU-DA.3: 35 residues within 4Å: Chain A: Q.43, N.44, T.46, G.47, Y.50, S.51, P.52, T.53 Chain B: L.22, G.30, S.31, E.32, Q.33, G.34, V.36, R.37, P.38, I.59, T.60, G.61, R.62, K.65, A.66, I.68, P.69, T.70, H.71, L.81, D.82, K.83, S.85, E.90, Q.91, E.102, L.104 Protein-ligand interaction information (PLIP) not available

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: Q.29, G.30 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain B: Q.29, G.30 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zorzini, V. et al., Substrate recognition, regulation mechanism and activity regulation of MazF mRNA interferase. To Be Published

Release Date

2016-09-28

Peptides

Endoribonuclease MazF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Endoribonuclease MazF

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