SMTL ID : 5dmi.1

Structure of the extracellular domain of the CD40 in complex with CHI220 FAB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.69 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain B: D.63, R.67 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.63 Salt bridges: B:R.67 SO4.2: 3 residues within 4Å: Chain C: S.52, H.53, S.54 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.54, C:S.54 Salt bridges: C:H.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamniuk, A.P. et al., Functional Antagonism of Human CD40 Achieved by Targeting a Unique Species-Specific Epitope. J.Mol.Biol. (2016)

Release Date

2016-06-01

Peptides

Tumor necrosis factor receptor superfamily member 5: A
Chi220 Fab heavy chain: B
Chi220 Fab light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Tumor necrosis factor receptor superfamily member 5

Chi220 Fab heavy chain

Chi220 Fab light chain

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