SMTL ID : 5e24.2 (2 other biounits)

Structure of the Su(H)-Hairless-DNA Repressor Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GLC- GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-functional Binders)

GLC-GLC-GLC-GLC.1: 21 residues within 4Å: Chain A: N.12, D.14, K.15, K.42, E.44, E.45, W.62, A.63, D.65, R.66, E.111, E.153, P.154, Y.155, F.156, W.230, M.330, W.340, Y.341, R.344 Ligands: EDO.14 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.42, A:E.44 Water bridges: A:D.41, A:K.42, A:Y.341

40 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: K.15, Y.17, N.18, D.296, K.297 Ligand excluded by PLIP EDO.3: 3 residues within 4Å: Chain A: S.211, I.212, A.215 Ligand excluded by PLIP EDO.4: 7 residues within 4Å: Chain A: K.15, G.16, W.230, V.293, K.297, P.298, L.299 Ligand excluded by PLIP EDO.5: 8 residues within 4Å: Chain A: K.42, E.45, K.46, Q.49 Chain C: R.9, E.13, D.364, Q.386 Ligand excluded by PLIP EDO.6: 6 residues within 4Å: Chain A: L.121, L.122, L.135, E.138, L.139, K.142 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: P.271, N.272, K.273, E.274, L.275 Ligand excluded by PLIP EDO.8: 6 residues within 4Å: Chain A: D.95, Y.176, I.329, M.330, P.331, N.332 Ligand excluded by PLIP EDO.9: 6 residues within 4Å: Chain A: A.301, E.308, A.312, I.317, A.318, M.321 Ligand excluded by PLIP EDO.10: 4 residues within 4Å: Chain A: T.31, I.33, L.275, E.278 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain A: E.130, E.131, P.133, A.134 Ligand excluded by PLIP EDO.12: 3 residues within 4Å: Chain A: T.128, E.130, E.131 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain A: G.13, D.14, Y.210, E.214, N.234, K.297 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain A: E.44, W.62, E.153 Ligands: GLC-GLC-GLC-GLC.1, GLC-GLC-GLC-GLC.1, GLC-GLC-GLC-GLC.1, GLC-GLC-GLC-GLC.1 Ligand excluded by PLIP EDO.15: 4 residues within 4Å: Chain A: R.354, Q.355, T.356, E.359 Ligand excluded by PLIP EDO.16: 4 residues within 4Å: Chain B: F.12, I.13, V.30, T.31 Ligand excluded by PLIP EDO.17: 3 residues within 4Å: Chain B: K.8, D.9, K.11 Ligand excluded by PLIP EDO.18: 7 residues within 4Å: Chain C: F.387, E.390, V.394, P.397, T.398, T.419, Y.420 Ligand excluded by PLIP EDO.19: 8 residues within 4Å: Chain C: L.51, W.56, L.75, L.93, N.94, G.95, K.96 Ligands: EDO.27 Ligand excluded by PLIP EDO.20: 5 residues within 4Å: Chain C: V.23, F.52, K.311, E.313, Q.315 Ligand excluded by PLIP EDO.21: 6 residues within 4Å: Chain C: V.25, Y.50, F.52, V.230, K.311 Ligands: EDO.34 Ligand excluded by PLIP EDO.22: 6 residues within 4Å: Chain C: K.135, K.311, A.312, E.313, Y.314, I.332 Ligand excluded by PLIP EDO.23: 3 residues within 4Å: Chain C: Q.386, F.387, E.390 Ligand excluded by PLIP EDO.24: 3 residues within 4Å: Chain C: T.8, R.9, D.10 Ligand excluded by PLIP EDO.25: 5 residues within 4Å: Chain C: W.391, L.392, P.397, T.421, P.422 Ligand excluded by PLIP EDO.26: 3 residues within 4Å: Chain C: M.16, R.19, P.401 Ligand excluded by PLIP EDO.27: 7 residues within 4Å: Chain C: L.51, F.52, G.53, W.56, T.57, Q.97 Ligands: EDO.19 Ligand excluded by PLIP EDO.28: 5 residues within 4Å: Chain C: C.76, F.78, Q.90, F.122 Ligands: EDO.30 Ligand excluded by PLIP EDO.29: 6 residues within 4Å: Chain C: P.236, R.237, M.266, K.267, T.269, Q.283 Ligand excluded by PLIP EDO.30: 5 residues within 4Å: Chain C: F.78, M.88, K.120, F.122 Ligands: EDO.28 Ligand excluded by PLIP EDO.31: 6 residues within 4Å: Chain C: K.30, V.31, D.154, C.156, Q.258, S.308 Ligand excluded by PLIP EDO.32: 5 residues within 4Å: Chain C: A.158, S.159, D.215, G.216, Y.217 Ligand excluded by PLIP EDO.33: 4 residues within 4Å: Chain C: V.131, P.326, T.328, P.329 Ligand excluded by PLIP EDO.34: 9 residues within 4Å: Chain C: L.27, Y.50, H.180, Q.192, W.193, G.194, A.195, V.230 Ligands: EDO.21 Ligand excluded by PLIP EDO.35: 8 residues within 4Å: Chain C: Q.33, R.41, F.42, C.44, F.166, R.168, L.259 Chain E: G.8 Ligand excluded by PLIP EDO.36: 2 residues within 4Å: Chain C: S.208, E.209 Ligand excluded by PLIP EDO.37: 9 residues within 4Å: Chain C: F.166, N.167, R.168, K.261, D.300, C.303, W.304, T.305 Ligands: EDO.41 Ligand excluded by PLIP EDO.38: 6 residues within 4Å: Chain C: E.313, Y.314, Q.315, A.413, T.414, G.415 Ligand excluded by PLIP EDO.39: 4 residues within 4Å: Chain C: N.38, E.39, K.40, F.105 Ligand excluded by PLIP EDO.40: 7 residues within 4Å: Chain C: C.48, Y.50, Y.98, A.100, T.191, Q.192, W.193 Ligand excluded by PLIP EDO.41: 6 residues within 4Å: Chain C: N.167, Q.246, K.261, D.300, C.303 Ligands: EDO.37 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuan, Z. et al., Structure and Function of the Su(H)-Hairless Repressor Complex, the Major Antagonist of Notch Signaling in Drosophila melanogaster. Plos Biol. (2016)

Release Date

2016-06-15

Peptides

Maltose-binding periplasmic protein: A
Protein hairless: B
Suppressor of hairless protein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
E

Maltose-binding periplasmic protein

Protein hairless

Suppressor of hairless protein

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