SMTL ID : 5enb.1

Crystal structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with o-Tolylthiourea (SGC - Diamond I04-1 fragment screening)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

1 x 5Q5: 1-(2-methylphenyl)thiourea(Non-covalent)

5Q5.1: 9 residues within 4Å: Chain A: P.31, F.32, V.36, Y.41, Y.44, N.82, S.83, Y.86, I.94 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.31, A:F.32, A:Y.86, A:I.94 Hydrogen bonds: A:P.31, A:Y.44 pi-Stacking: A:Y.41

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: D.37, L.39, E.40 No protein-ligand interaction detected (PLIP) EDO.3: 3 residues within 4Å: Chain A: R.77, S.110, L.113 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.77, A:R.77, A:S.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cox, O.B. et al., A poised fragment library enables rapid synthetic expansion yielding the first reported inhibitors of PHIP(2), an atypical bromodomain. Chem Sci (2016)

Release Date

2016-04-27

Peptides

PH-interacting protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PH-interacting protein

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