SMTL ID : 5enc.1

Crystal structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with N-(2,6-Dichlorobenzyl)acetamide (SGC - Diamond I04-1 fragment screening)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: F.80, S.83, K.84, Y.95, S.98, L.99 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.84, A:S.98 Water bridges: A:S.83, A:S.98 EDO.2: 3 residues within 4Å: Chain A: A.55, T.56, E.59 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.56

1 x 5QD: ~{N}-[[2,6-bis(chloranyl)phenyl]methyl]ethanamide(Non-covalent)

5QD.3: 6 residues within 4Å: Chain A: P.31, V.36, Y.41, Y.44, Y.86, I.94 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.36 pi-Stacking: A:Y.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cox, O.B. et al., A poised fragment library enables rapid synthetic expansion yielding the first reported inhibitors of PHIP(2), an atypical bromodomain. Chem Sci (2016)

Release Date

2016-04-27

Peptides

PH-interacting protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PH-interacting protein

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