SMTL ID : 5ev3.1

Structure III of Intact U2AF65 Recognizing the 3' Splice Site Signal

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x U- U- DU- U- U- BRU- DU- DU: DNA/RNA (5'-R(P*UP*U)-D(P*U)-R(P*UP*U)-D(P*(BRU)P*UP*U)-3')(Non-covalent)

U-U-DU-U-U-BRU-DU-DU.1: 41 residues within 4Å: Chain A: R.6, Q.7, R.10, Y.12, N.15, K.55, N.56, F.57, F.59, K.85, R.87, R.88, P.89, H.90, D.91, T.112, V.113, V.114, D.116, K.120, F.122, G.124, G.125, N.149, V.151, K.152, S.154, K.160, Y.162, F.164, K.188, K.189, L.190, L.191, Q.193, R.194, A.195, V.197, G.198, A.199, K.200 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.88, A:H.90 Water bridges: A:R.87, A:H.90, A:H.90 Salt bridges: A:K.55 pi-Stacking: A:Y.12, A:H.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agrawal, A.A. et al., An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun (2016)

Release Date

2016-02-24

Peptides

Splicing factor U2AF 65 kDa subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Splicing factor U2AF 65 kDa subunit

Related Entries With Identical Sequence