SMTL ID : 5eyr.1

Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 5 at 1.57A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

homo-dimer

Ligands

2 x 5T0: 3-[1-[4-(methylaminomethyl)phenyl]piperidin-4-yl]-1-pyrrolidin-1-yl-propan-1-one(Non-covalent)

5T0.1: 15 residues within 4Å: Chain A: L.91, L.94, M.106, W.107, G.110, I.111, F.114, M.146, W.149, Y.152, N.180, N.183, E.184, L.187, W.211 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.91, A:L.94, A:W.107, A:I.111, A:F.114, A:F.114, A:W.149, A:W.211 Hydrogen bonds: A:Y.152, A:N.183 Water bridges: A:A.95 pi-Stacking: A:Y.152 5T0.2: 15 residues within 4Å: Chain B: L.91, L.94, M.106, W.107, G.110, I.111, F.114, M.146, W.149, Y.152, N.180, N.183, E.184, L.187, W.211 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.91, B:L.94, B:W.107, B:I.111, B:F.114, B:F.114, B:W.149, B:W.211 Hydrogen bonds: B:N.183 Water bridges: B:A.95 pi-Stacking: B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikiforov, P.O. et al., A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters. Org.Biomol.Chem. (2016)

Release Date

2016-02-03

Peptides

EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

EthR

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