SMTL ID : 5f0h.1

Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 28 at 1.99A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x 5TC: 3-[1-(4-cyanophenyl)piperidin-4-yl]-~{N}-[(4-piperidin-1-ylphenyl)methyl]propanamide(Non-covalent)

5TC.1: 18 residues within 4Å: Chain A: L.80, V.84, L.91, L.94, M.106, W.107, G.110, I.111, F.114, W.142, M.146, W.149, Y.152, N.180, N.183, E.184, F.188, W.211 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.84, A:L.94, A:W.107, A:I.111, A:F.114, A:F.114, A:W.149, A:W.149, A:Y.152, A:N.183, A:E.184, A:F.188, A:W.211, A:W.211 Hydrogen bonds: A:N.180, A:N.183 pi-Stacking: A:W.142, A:W.142 5TC.2: 18 residues within 4Å: Chain B: L.80, V.84, L.91, L.94, M.106, W.107, G.110, I.111, F.114, W.142, M.146, W.149, Y.152, N.180, N.183, E.184, F.188, W.211 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:V.84, B:L.94, B:W.107, B:I.111, B:F.114, B:F.114, B:W.149, B:W.149, B:Y.152, B:N.183, B:E.184, B:F.188, B:W.211, B:W.211 Hydrogen bonds: B:N.180, B:N.183 pi-Stacking: B:W.142, B:W.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikiforov, P.O. et al., A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters. Org.Biomol.Chem. (2016)

Release Date

2016-02-03

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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