SMTL ID : 5f2m.1 (1 other biounit)

Tagatose-1,6-bisphosphate aldolase from Streptococcus pyogenes in complex with competitive inhibitor hexitol-1,6-bisphosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-dimer

Ligands

1 x M2P: D-MANNITOL-1,6-DIPHOSPHATE(Non-covalent)

M2P.1: 25 residues within 4Å: Chain A: A.26, D.28, Q.29, R.30, G.31, A.32, L.33, R.35, L.69, T.95, G.96, K.126, L.128, E.164, L.166, K.206, L.249, S.250, A.251, G.252, L.276, C.277, G.278, R.279, A.280 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:D.28, A:Q.29, A:R.30, A:G.31, A:A.32, A:T.95, A:G.96, A:K.206, A:S.250, A:S.250, A:S.250, A:S.250, A:A.251, A:G.252, A:G.278, A:R.279, A:R.279 Water bridges: A:D.28, A:R.35, A:R.35 Salt bridges: A:R.279

4 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: E.198 No protein-ligand interaction detected (PLIP) CA.3: 4 residues within 4Å: Chain A: E.239, A.240, T.242, D.243 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.239, A:E.239, A:T.242, H2O.1, H2O.7 CA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.5: 1 residues within 4Å: Chain B: E.85 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.85, H2O.16, H2O.17, H2O.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

LowKam, C. et al., NON-STEREOSPECIFIC SUBSTRATE CLEAVAGE BY TAGATOSE-BISPHOSPHATE CLASS I ALDOLASE. To Be Published

Release Date

2016-12-07

Peptides

Tagatose 1,6-diphosphate aldolase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Tagatose 1,6-diphosphate aldolase 2

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