SMTL ID : 5fbq.1

PI4KB in complex with Rab11 and the MI358 Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.79 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 5W6: ~{N}-[2-[[6-chloranyl-3-[3-[4-(hydroxymethyl)piperidin-1-yl]sulfonyl-4-methoxy-phenyl]-2-methyl-imidazo[1,2-b]pyridazin-8-yl]amino]ethyl]ethanamide(Non-covalent)

5W6.1: 17 residues within 4Å: Chain A: L.262, P.269, Y.273, W.310, I.335, K.337, Y.371, I.383, E.384, P.385, V.386, V.387, A.389, G.448, N.449, L.451, I.461 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.310, A:I.335, A:Y.371, A:I.383, A:V.387, A:I.461 Hydrogen bonds: A:Y.273, A:K.337, A:V.386, A:V.386, A:N.449

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 18 residues within 4Å: Chain B: G.26, V.27, G.28, K.29, S.30, N.31, F.41, N.42, L.43, S.45, D.71, N.129, K.130, D.132, L.133, S.159, A.160, L.161 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:G.26, B:G.28, B:K.29, B:S.30, B:S.30, B:L.43, B:S.45, B:S.45, B:N.129, B:L.161 Salt bridges: B:D.132 pi-Stacking: B:F.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chalupska, D. et al., PI4KB in complex with Rab11 and the MI358 Inhibitor. To Be Published

Release Date

2016-12-28

Peptides

Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta: A
Ras-related protein Rab-11A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta

Ras-related protein Rab-11A

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