SMTL ID : 5fbv.1

PI4KB in complex with Rab11 and the MI364 Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.29 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 5W3: ~{N}-[2-[[6-chloranyl-3-[3-(2-hydroxyethylsulfamoyl)-4-methoxy-phenyl]-2-methyl-imidazo[1,2-b]pyridazin-8-yl]amino]ethy l]ethanamide(Non-covalent)

5W3.1: 18 residues within 4Å: Chain A: L.262, P.269, L.271, Y.273, E.308, I.335, K.337, Y.371, I.383, E.384, P.385, V.386, V.387, N.388, A.389, L.451, I.461, D.462 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.335, A:Y.371, A:Y.371, A:V.386, A:I.461, A:I.461 Hydrogen bonds: A:Y.273, A:Y.273, A:K.337, A:K.337, A:V.386, A:A.389

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.2: 26 residues within 4Å: Chain A: E.26, G.28, Y.32 Chain B: S.25, G.26, V.27, G.28, K.29, S.30, N.31, F.41, N.42, L.43, S.45, K.46, S.47, T.48, A.73, G.74, N.129, K.130, D.132, L.133, S.159, A.160, L.161 21 PLIP interactions: 20 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.26, B:G.28, B:K.29, B:S.30, B:S.30, B:S.30, B:N.31, B:S.45, B:S.45, B:T.48, B:T.48, B:N.129, B:K.130, B:K.130, B:A.160, B:L.161, A:G.28 Salt bridges: B:D.132 pi-Stacking: B:F.41, B:F.41 pi-Cation interactions: B:K.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chalupska, D. et al., PI4KB in complex with Rab11 and the MI364 Inhibitor. To Be Published

Release Date

2016-12-28

Peptides

Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta: A
Ras-related protein Rab-11A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta

Ras-related protein Rab-11A

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