SMTL ID : 5fhz.2 (1 other biounit)

Human aldehyde dehydrogenase 1A3 complexed with NAD(+) and retinoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 26 residues within 4Å: Chain A: I.194, T.195, P.196, W.197, N.198, K.221, P.222, A.223, E.224, Q.225, G.254, P.255, G.258, A.259, F.272, T.273, G.274, S.275, V.278, V.282, L.298, G.299, C.331, Q.378, E.428, F.430 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.196 Hydrogen bonds: A:T.195, A:T.195, A:W.197, A:K.221, A:E.224, A:Q.225, A:G.274, A:S.275, A:Q.378, A:Q.378, A:E.428 pi-Stacking: A:F.430 NAD.2: 22 residues within 4Å: Chain B: I.194, T.195, P.196, W.197, K.221, P.222, A.223, E.224, G.254, G.258, A.259, F.272, T.273, G.274, S.275, E.277, V.278, L.281, D.375, K.377, Q.378, K.381 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:T.195, B:T.195, B:K.221, B:E.224, B:S.275, B:E.277, B:K.377, B:Q.378, B:K.381 NAD.3: 18 residues within 4Å: Chain C: I.194, T.195, P.196, W.197, K.221, P.222, A.223, E.224, G.254, G.258, A.259, F.272, G.274, S.275, E.277, V.278, K.377, K.381 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:T.195, C:W.197, C:K.221, C:E.224, C:S.275, C:S.275, C:K.377, C:K.377, C:K.381, C:K.381 pi-Cation interactions: C:K.381 NAD.4: 20 residues within 4Å: Chain D: I.194, T.195, P.196, W.197, K.221, P.222, A.223, E.224, G.254, G.258, A.259, F.272, T.273, G.274, S.275, E.277, V.278, K.377, Q.378, K.381 11 PLIP interactions: 11 interactions with chain D Hydrophobic interactions: D:V.278 Hydrogen bonds: D:T.195, D:T.195, D:W.197, D:K.221, D:E.224, D:S.275, D:S.275, D:E.277, D:K.377, D:Q.378

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moretti, A. et al., Crystal structure of human aldehyde dehydrogenase 1A3 complexed with NAD(+) and retinoic acid. Sci Rep (2016)

Release Date

2016-11-02

Peptides

Aldehyde dehydrogenase family 1 member A3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Aldehyde dehydrogenase family 1 member A3

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