SMTL ID : 5fps.1

Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 3-aminobenzene-1,2-dicarboxylic acid (AT1246) in an alternate binding site.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

homo-dimer

Ligands

2 x UP8: 3-AMINOBENZENE-1,2-DICARBOXYLIC ACID(Non-covalent)

UP8.1: 9 residues within 4Å: Chain A: T.241, G.242, S.243, G.244, K.245, S.246, T.247, F.273, R.502 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.273 Hydrogen bonds: A:G.242, A:S.243, A:G.244, A:S.246, A:S.246, A:T.247 Water bridges: A:K.245 UP8.2: 8 residues within 4Å: Chain B: G.242, S.243, G.244, K.245, S.246, T.247, F.273, R.502 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:F.273 Hydrogen bonds: B:G.242, B:G.244, B:S.246, B:S.246 Water bridges: B:K.248 Salt bridges: B:K.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ludlow, R.F. et al., Detection of Secondary Binding Sites in Proteins Using Fragment Screening. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-12-23

Peptides

HEPATITIS C VIRUS FULL-LENGTH NS3 COMPLEX: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HEPATITIS C VIRUS FULL-LENGTH NS3 COMPLEX

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