SMTL ID : 5fpt.1

Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 2-(1-methyl-1H-indol-3-yl)acetic acid (AT3437) in an alternate binding site.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

homo-dimer

Ligands

2 x 3VY: (1-methyl-1H-indol-3-yl)acetic acid(Non-covalent)

3VY.1: 8 residues within 4Å: Chain A: T.289, G.290, T.304, G.306, K.307, A.310, W.536, Y.537 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.310, A:W.536 Hydrogen bonds: A:G.290, A:T.304 Water bridges: A:V.291 3VY.2: 10 residues within 4Å: Chain B: V.267, T.289, G.290, T.304, G.306, K.307, A.310, T.333, W.536, Y.537 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:A.310, B:Y.537 Hydrogen bonds: B:G.290, B:T.304, B:T.304

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ludlow, R.F. et al., Detection of Secondary Binding Sites in Proteins Using Fragment Screening. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-12-23

Peptides

HEPATITIS C VIRUS FULL-LENGTH NS3 COMPLEX: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HEPATITIS C VIRUS FULL-LENGTH NS3 COMPLEX

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