SMTL ID : 5gr8.1 (1 other biounit)

Crystal structure of PEPR1-AtPEP1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 10 residues within 4Å: Chain A: H.199, R.200, F.221, G.223, N.224, D.245, Y.248 Chain B: V.8, S.9, S.10 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.8, B:S.10, B:S.10

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: N.392, G.416, S.440 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.392, A:S.440, A:S.440 NAG.3: 8 residues within 4Å: Chain A: S.510, R.511, Y.530, N.532, S.534, R.554, D.556, T.578 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:D.556, A:T.578 Hydrogen bonds: A:S.510, A:Y.530, A:N.532, A:S.534, A:D.556, A:D.556 NAG.4: 8 residues within 4Å: Chain A: G.234, S.235, P.236, P.257, A.258, G.260, N.261, M.285 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.261 NAG.5: 5 residues within 4Å: Chain A: N.53, T.55, I.75, D.77, T.99 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.75, A:T.99 Hydrogen bonds: A:N.53, A:D.77, A:D.77

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 4 residues within 4Å: Chain A: P.230, V.231, G.253, G.254 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.231, A:G.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tang, J. et al., Structural basis for recognition of an endogenous peptide by the plant receptor kinase PEPR1. Cell Res. (2015)

Release Date

2016-12-14

Peptides

Leucine-rich repeat receptor-like protein kinase PEPR1: A
Elicitor peptide 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
J

Leucine-rich repeat receptor-like protein kinase PEPR1

Elicitor peptide 1

Related Entries With Identical Sequence