SMTL ID : 5h1v.2 (1 other biounit)

Complex structure of TRIM24 PHD-bromodomain and inhibitor 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.6, C.9, H.26, C.29 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.6, A:C.9, A:H.26, A:C.29 ZN.2: 4 residues within 4Å: Chain A: C.18, C.21, C.44, C.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:C.44, A:C.47

1 x 7FU: 2-Hydrazino-1,3-benzothiazole-6-carbohydrazide(Non-covalent)

7FU.3: 11 residues within 4Å: Chain A: A.100, F.101, V.105, V.109, Y.112, I.149, N.152, C.153, F.156, N.157, V.163 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.105, A:V.163 Hydrogen bonds: A:I.149, A:N.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., The polar warhead of a TRIM24 bromodomain inhibitor rearranges a water-mediated interaction network. FEBS J. (2017)

Release Date

2017-02-22

Peptides

Transcription intermediary factor 1-alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Transcription intermediary factor 1-alpha

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