SMTL ID : 5hav.1

Sperm whale myoglobin mutant L29H F33Y F43H (F33Y CuBMb) with oxygen bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.27 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: T.39, K.42, H.43, R.45, H.64, T.67, V.68, A.71, L.89, S.92, H.93, H.97, I.99, Y.103, L.104, I.107 Ligands: OXY.2 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:T.67, A:V.68, A:V.68, A:A.71, A:L.89, A:L.89, A:I.99, A:I.99, A:Y.103, A:I.107 Hydrogen bonds: A:S.92 Water bridges: A:H.43, A:R.45, A:R.45, A:R.45, A:H.64 Salt bridges: A:R.45, A:H.93, A:H.97 pi-Stacking: A:H.64, A:H.97 Metal complexes: A:H.93

1 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.2: 5 residues within 4Å: Chain A: H.43, H.64, V.68, H.93 Ligands: HEM.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petrik, I.D. et al., Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin. J.Am.Chem.Soc. (2016)

Release Date

2016-01-13

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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