SMTL ID : 5hg7.1

EGFR (L858R, T790M, V948R) in complex with 1-{(3R,4R)-3-[5-Chloro-2-(1-methyl-1H-pyrazol-4-ylamino)-7H-pyrrolo[2,3-d]pyrimidin-4-yloxymethyl]-4-methoxy-pyrrolidin-1-yl}propenone (PF-06459988)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x 630: 1-{(3R,4R)-3-[({5-chloro-2-[(1-methyl-1H-pyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}oxy)methyl]-4-methoxypyrrolidin-1-yl}propan-1-one(Covalent)

630.1: 18 residues within 4Å: Chain A: L.25, G.26, S.27, F.30, V.33, A.50, C.82, M.97, Q.98, L.99, M.100, P.101, G.103, C.104, D.107, R.148, L.151, F.163 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:A.50, A:R.148, A:L.151 Hydrogen bonds: A:S.27, A:Q.98, A:M.100, A:M.100, A:G.103 Water bridges: A:C.104, A:C.104

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: R.143, R.165, Y.176, A.178, E.179, G.180, G.181 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:R.165, A:E.179, A:G.181 Water bridges: A:R.143, A:R.143, A:K.167, A:K.167, A:G.180 Salt bridges: A:R.143, A:K.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, H. et al., Discovery of 1-{(3R,4R)-3-[({5-Chloro-2-[(1-methyl-1H-pyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}oxy)methyl]-4-methoxypyrrolidin-1-yl}prop-2-en-1-one (PF-06459988), a Potent, WT Sparing, Irreversible Inhibitor of T790M-Containing EGFR Mutants. J.Med.Chem. (2016)

Release Date

2016-01-27

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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