SMTL ID : 5irc.2 (2 other biounits)

p190A GAP domain complex with RhoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: P.12, L.13, P.91, D.92 Ligand excluded by PLIP

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 18 residues within 4Å: Chain A: R.46 Chain B: D.18, G.19, A.20, C.21, G.22, K.23, T.24, C.25, Y.39, K.123, D.125, L.126, S.165, A.166, K.167 Ligands: MG.3, MGF.4 22 PLIP interactions: 16 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:A.20, B:C.21, B:G.22, B:K.23, B:T.24, B:T.24, B:K.123, B:K.123, B:A.166, B:K.167, A:E.42 Water bridges: B:T.24, B:L.26, B:T.42, B:K.123, A:R.46, A:R.46, A:R.46 Salt bridges: B:K.23, B:D.125, A:R.46, A:R.46

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain B: T.24, T.42, D.64 Ligands: GDP.2, MGF.4 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:T.24, B:T.42, H2O.12, H2O.13

1 x MGF: TRIFLUOROMAGNESATE(Non-covalent)

MGF.4: 12 residues within 4Å: Chain A: R.46 Chain B: D.18, G.19, A.20, K.23, P.41, T.42, A.66, G.67, Q.68 Ligands: GDP.2, MG.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amin, E. et al., Deciphering the Molecular and Functional Basis of RHOGAP Family Proteins: A SYSTEMATIC APPROACH TOWARD SELECTIVE INACTIVATION OF RHO FAMILY PROTEINS. J.Biol.Chem. (2016)

Release Date

2016-08-17

Peptides

Rho GTPase-activating protein 35: A
Transforming protein RhoA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Rho GTPase-activating protein 35

Transforming protein RhoA

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