SMTL ID : 5izd.2 (1 other biounit)

Wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-tetramer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 19 residues within 4Å: Chain C: L.145, T.146, W.148, K.172, P.173, S.174, S.175, G.203, G.205, G.209, D.210, V.213, M.223, T.224, G.225, S.226, T.229, R.232, I.233 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:T.146, C:S.174, C:S.175, C:G.205, C:D.210, C:D.210, C:S.226, C:S.226, C:T.229 Salt bridges: C:K.172 NAP.2: 20 residues within 4Å: Chain D: L.145, T.146, W.148, K.172, P.173, S.174, S.175, G.203, R.204, G.205, G.209, D.210, V.213, M.223, T.224, G.225, S.226, T.229, R.232, I.233 14 PLIP interactions: 14 interactions with chain D Hydrogen bonds: D:T.146, D:W.148, D:S.174, D:S.175, D:G.205, D:D.210, D:D.210, D:D.210, D:S.226, D:T.229, D:T.229 Water bridges: D:S.206, D:G.209 Salt bridges: D:K.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iermak, I. et al., Structure of wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP. To Be Published

Release Date

2017-04-05

Peptides

D-glyceraldehyde dehydrogenase (NADP(+)): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

D-glyceraldehyde dehydrogenase (NADP(+))

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