SMTL ID : 5izf.1

Complex of PKA with the bisubstrate protein kinase inhibitor ARC-1408

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 6J9- AZ1- DAR- ACA- DAR- NH2: 6J9-ZEU-DAR-ACA-DAR-NH2(Non-covalent)

6J9-AZ1-DAR-ACA-DAR-NH2.1: 32 residues within 4Å: Chain A: L.50, G.51, T.52, G.53, S.54, F.55, G.56, R.57, V.58, A.71, K.73, L.75, V.105, E.122, Y.123, V.124, E.128, F.130, D.167, K.169, P.170, E.171, L.174, T.184, F.188, G.201, T.202, P.203, E.204, Y.205, E.231, F.328 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.55, A:A.71, A:L.75, A:L.174, A:T.202 Hydrogen bonds: A:S.54, A:F.55, A:E.122, A:V.124, A:E.128, A:K.169, A:G.201, A:T.202 Salt bridges: A:D.167, A:E.171, A:E.204, A:E.231

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: F.258, K.267, R.271 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.267, A:R.271 SO4.3: 2 residues within 4Å: Chain A: W.31, R.94 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.94 SO4.4: 3 residues within 4Å: Chain A: P.259, S.260, H.261 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.260, A:S.260, A:H.261 Water bridges: A:H.261 SO4.5: 2 residues within 4Å: Chain A: I.304, Y.307 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ivan, T. et al., Bifunctional Ligands for Inhibition of Tight-Binding Protein-Protein Interactions. Bioconjug.Chem. (2016)

Release Date

2016-07-20

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP-dependent protein kinase catalytic subunit alpha

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