SMTL ID : 5j5x.1

Complex of PKA with the bisubstrate protein kinase inhibitor ARC-1416

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x 6J9- ZEU- DAL- DAR- DAR- DAR- DAR- NH2: 47P-AZ1-DAL-DAR-DAR-DAR-DAR(Non-covalent)

6J9-ZEU-DAL-DAR-DAR-DAR-DAR-NH2.1: 24 residues within 4Å: Chain A: L.50, G.51, T.52, G.53, S.54, F.55, G.56, R.57, V.58, A.71, K.73, E.122, Y.123, V.124, E.128, F.130, K.169, E.171, L.174, T.184, D.185, E.204, E.231, F.328 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.71, A:L.174, A:T.184, A:F.55, A:F.55, A:V.58 Hydrogen bonds: A:V.124, A:E.128, A:S.54, A:T.52, A:S.54, A:F.55 Salt bridges: A:E.171, A:E.204, A:E.231

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: F.258, K.267, R.271 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.267, A:R.271 SO4.3: 2 residues within 4Å: Chain A: W.31, R.94 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.31 Salt bridges: A:R.94 SO4.4: 2 residues within 4Å: Chain A: I.211, S.213 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.213, A:S.213

1 x 6J9: 4-(piperazin-1-yl)-7H-pyrrolo[2,3-d]pyrimidine(Non-covalent)

6J9.5: 8 residues within 4Å: Chain A: V.16, F.19, F.101, L.153, E.156, K.293, I.304, Y.307 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.16, A:F.19, A:Y.307 Hydrogen bonds: A:K.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ivan, T. et al., Bifunctional Ligands for Inhibition of Tight-Binding Protein-Protein Interactions. Bioconjug.Chem. (2016)

Release Date

2016-07-20

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP-dependent protein kinase catalytic subunit alpha

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