SMTL ID : 5j4h.1

Structure of humanised RadA-mutant humRadA22F in complex with indole-6-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

monomer

Ligands

1 x 1F1: 1H-indole-6-carboxylic acid(Non-covalent)

1F1.1: 10 residues within 4Å: Chain A: M.63, Y.64, I.65, A.95, Y.96, A.97, L.108, Q.111, A.112, L.129 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.65, A:A.97, A:Q.111 Hydrogen bonds: A:Y.64, A:A.95

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 1 residues within 4Å: Chain A: N.93 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.93 Water bridges: A:N.93, A:R.124 NA.3: 4 residues within 4Å: Chain A: Q.25, A.26, H.163, N.167 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.25, A:N.167

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 5 residues within 4Å: Chain A: G.35, G.37, K.38, T.39, Q.40 No protein-ligand interaction detected (PLIP)

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.5: 2 residues within 4Å: Chain A: R.145, G.146 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moschetti, T. et al., Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51. J.Mol.Biol. (2016)

Release Date

2016-10-19

Peptides

DNA repair and recombination protein RadA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein RadA

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