SMTL ID : 5j79.1

The identification and pharmacological characterization of 6-(tert-butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a highly potent and selective inhibitor of RIP2 Kinase, Compound 3 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

2 x 6GE: 4-methyl-3-{[6-(methylsulfonyl)quinolin-4-yl]amino}phenol(Non-covalent)

6GE.1: 14 residues within 4Å: Chain A: L.40, S.41, V.48, A.61, K.63, E.82, L.95, T.111, E.112, Y.113, M.114, L.169, A.179, D.180 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.40, A:V.48, A:K.63, A:L.95, A:T.111, A:A.179 Hydrogen bonds: A:K.63, A:E.82, A:M.114, A:D.180 6GE.4: 13 residues within 4Å: Chain B: S.41, V.48, A.61, K.63, E.82, L.95, T.111, E.112, Y.113, M.114, L.169, A.179, D.180 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:V.48, B:K.63, B:K.63, B:L.95, B:T.111 Hydrogen bonds: B:E.82, B:M.114, B:D.180, B:D.180

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.126, P.130, R.137, R.241 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.137 Water bridges: A:R.137 Salt bridges: A:K.126, A:R.241 SO4.3: 4 residues within 4Å: Chain A: R.125, K.126, T.127, E.128 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.125, A:T.127, A:E.128 Water bridges: A:K.126, A:K.126 Salt bridges: A:R.125 SO4.5: 3 residues within 4Å: Chain B: H.152, S.298, F.299 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:F.299 Water bridges: B:N.149, B:H.152, B:S.298, B:L.300 Salt bridges: B:H.152 SO4.6: 2 residues within 4Å: Chain B: N.250, L.252 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.250 SO4.7: 4 residues within 4Å: Chain B: K.126, P.130, R.137, R.241 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.137 Water bridges: B:V.132 Salt bridges: B:K.126, B:R.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haile, P.A. et al., The Identification and Pharmacological Characterization of 6-(tert-Butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a Highly Potent and Selective Inhibitor of RIP2 Kinase. J.Med.Chem. (2016)

Release Date

2016-05-18

Peptides

Receptor-interacting serine/threonine-protein kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 2

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