SMTL ID : 5jfi.1 (1 other biounit)

Crystal structure of a TDIF-TDR complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: S.60, H.61, Y.80, N.82, S.84, D.106 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.106 Hydrogen bonds: A:S.60, A:S.84, A:D.106 NAG.2: 2 residues within 4Å: Chain A: N.327, S.351 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.327, A:S.351 NAG.3: 9 residues within 4Å: Chain A: S.420, N.421, Y.440, N.442, S.444, I.464, S.466, R.487, E.489 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.464 Hydrogen bonds: A:S.420, A:N.442, A:S.466, A:E.489 Water bridges: A:Y.440 NAG.4: 1 residues within 4Å: Chain A: N.496 No protein-ligand interaction detected (PLIP) NAG.5: 4 residues within 4Å: Chain A: N.302, N.325, N.326, N.349 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, G. et al., Crystal structure of a TDIF-TDR complex. To Be Published

Release Date

2017-03-29

Peptides

Leucine-rich repeat receptor-like protein kinase TDR: A
CLE41: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Leucine-rich repeat receptor-like protein kinase TDR

CLE41

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