SMTL ID : 5jms.1

Crystal structure of TgCDPK1 bound to CGP060476

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 6LP: N~1~-(4-{2-[(3-chlorophenyl)amino]pyrimidin-4-yl}pyridin-2-yl)ethane-1,2-diamine(Non-covalent)

6LP.1: 17 residues within 4Å: Chain A: L.75, G.76, V.83, A.96, K.98, M.130, L.132, L.144, E.147, V.148, Y.149, G.152, E.153, L.199, I.212, D.213, L.216 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.75, A:V.83, A:V.83, A:A.96, A:L.199, A:I.212 Hydrogen bonds: A:K.98, A:Y.149, A:D.213 Water bridges: A:K.98, A:L.144

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.469, D.471, S.473, G.474, K.475 Ligands: EDO.4 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.469, A:D.471, A:S.473, A:K.475, H2O.2

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: G.243, T.244, Y.245 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.243, A:Y.245, A:Y.245 EDO.4: 8 residues within 4Å: Chain A: D.471, S.473, K.475, I.476, S.477, E.480, E.509 Ligands: CA.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.471, A:S.473

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Bakkouri, M. et al., Crystal structure of TgCDPK1bount to CGP060476. To Be Published

Release Date

2016-05-18

Peptides

Calmodulin-domain protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Calmodulin-domain protein kinase 1

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