SMTL ID : 5jpc.1

Joint X-ray/neutron structure of MTAN complex with Formycin A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FMC: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol(Covalent)

FMC.1: 21 residues within 4Å: Chain A: A.8, M.9, I.51, V.77, A.78, G.79, Q.151, F.152, V.153, V.171, E.172, M.173, E.174, R.193, S.196, D.197, A.199, A.203, F.207 Chain B: L.103, F.106 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.79, A:V.153, A:M.173, A:R.193, A:R.193, A:R.193, A:D.197, A:D.197 pi-Stacking: A:F.152 FMC.2: 21 residues within 4Å: Chain A: L.103, F.106 Chain B: A.8, M.9, I.51, V.77, A.78, G.79, Q.151, F.152, V.153, V.171, E.172, M.173, E.174, R.193, S.196, D.197, A.199, A.203, F.207 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:G.79, B:V.153, B:M.173, B:R.193, B:R.193, B:R.193, B:D.197, B:D.197 pi-Stacking: B:F.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Banco, M.T. et al., Neutron structures of the Helicobacter pylori 5'-methylthioadenosine nucleosidase highlight proton sharing and protonation states. Proc. Natl. Acad. Sci. U.S.A. (2016)

Release Date

2016-11-16

Peptides

Aminodeoxyfutalosine nucleosidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Aminodeoxyfutalosine nucleosidase

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