SMTL ID : 5jyi.1

Trypsin bound with succinic acid at 1.9A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.75, N.77, V.80, E.82, E.85 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.75, A:N.77, A:E.85, H2O.2, H2O.9

1 x SIN: SUCCINIC ACID(Non-covalent)

SIN.2: 7 residues within 4Å: Chain A: F.47, C.48, H.63, Y.154, Q.197, G.198, S.200 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.154, A:Y.154, A:G.198, A:S.200 Water bridges: A:K.66 Salt bridges: A:H.63

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: A.32, N.33, E.75, D.76, L.158 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.33, A:D.76 Water bridges: A:E.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Manohar, R. et al., Trypsin bound with succinic acid at 1.9A. To Be Published

Release Date

2016-07-06

Peptides

Cationic trypsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cationic trypsin

Related Entries With Identical Sequence