SMTL ID : 5k1c.1

Crystal structure of the UAF1/WDR20/USP12 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.171, C.174, C.218, C.221 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.171, A:C.174, A:C.218, A:C.221

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain B: K.168, R.193, K.202, K.205 4 PLIP interactions: 4 interactions with chain B Salt bridges: B:K.168, B:R.193, B:K.202, B:K.205

1 x TAM: TRIS(HYDROXYETHYL)AMINOMETHANE(Non-covalent)

TAM.3: 6 residues within 4Å: Chain C: D.63, Y.78, Y.315, L.542, E.543, D.544 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:L.542, C:L.542, C:E.543 Hydrogen bonds: C:D.63, C:Y.315, C:E.543, C:D.544, C:D.544

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell (2016)

Release Date

2016-07-20

Peptides

Ubiquitin carboxyl-terminal hydrolase 12: A
WD repeat-containing protein 48: B
WD repeat-containing protein 20: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Ubiquitin carboxyl-terminal hydrolase 12

WD repeat-containing protein 48

WD repeat-containing protein 20

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