SMTL ID : 5ka2.1

Protein Tyrosine Phosphatase 1B YAYA (Y152A, Y153A) mutant, open state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: P.94, C.97, A.127, Q.128, M.138, F.140 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.98 GOL.2: 7 residues within 4Å: Chain A: E.81, L.239, R.243, K.253, V.254, E.257 Ligands: CL.6 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.81, A:R.243 Water bridges: A:E.81, A:E.81, A:E.257

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 3 residues within 4Å: Chain A: K.133, E.134, E.135 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.134, A:E.134, A:E.135

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: Y.25, R.29, R.259, G.264 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: M.119, E.120, K.121, G.122 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain A: R.243, S.248, V.249, D.250 Ligands: GOL.2 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain A: C.220, S.221, A.222, R.226 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain A: R.50, P.94, C.126, A.127 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain A: R.117, V.118, H.180 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choy, M.S. et al., Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery. Mol. Cell (2017)

Release Date

2017-03-08

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 1

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