SMTL ID : 5kan.1

Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.g.07 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

hetero-3-3-3-3-mer

Ligands

17 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.15 Ligand excluded by PLIP NAG.2: 4 residues within 4Å: Chain A: T.30, N.31 Chain H: E.104, V.105 Ligand excluded by PLIP NAG.3: 3 residues within 4Å: Chain A: Q.73, N.74, F.113 Ligand excluded by PLIP NAG.4: 2 residues within 4Å: Chain A: N.158 Chain C: S.212 Ligand excluded by PLIP NAG.5: 4 residues within 4Å: Chain A: S.38, N.278, V.290, N.291 Ligand excluded by PLIP NAG.6: 5 residues within 4Å: Chain B: A.144, E.147, S.148, N.151, T.153 Ligand excluded by PLIP NAG.7: 3 residues within 4Å: Chain C: T.30, N.31 Chain G: V.105 Ligand excluded by PLIP NAG.8: 5 residues within 4Å: Chain C: Q.73, N.74, F.113, T.115, R.143 Ligand excluded by PLIP NAG.9: 3 residues within 4Å: Chain C: N.158, T.160 Chain E: S.212 Ligand excluded by PLIP NAG.10: 4 residues within 4Å: Chain C: S.38, N.278, V.290, N.291 Ligand excluded by PLIP NAG.11: 5 residues within 4Å: Chain D: A.144, E.147, S.148, N.151, T.153 Ligand excluded by PLIP NAG.12: 3 residues within 4Å: Chain E: P.14, N.15, E.28 Ligand excluded by PLIP NAG.13: 4 residues within 4Å: Chain E: T.30, N.31 Chain J: E.104, V.105 Ligand excluded by PLIP NAG.14: 5 residues within 4Å: Chain E: Q.73, N.74, E.112, F.113, I.114 Ligand excluded by PLIP NAG.15: 4 residues within 4Å: Chain A: S.212, W.215 Chain E: N.158, T.160 Ligand excluded by PLIP NAG.16: 3 residues within 4Å: Chain E: S.38, N.278, V.290 Ligand excluded by PLIP NAG.17: 5 residues within 4Å: Chain F: A.144, E.147, S.148, N.151, T.153 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joyce, M.G. et al., Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses. Cell(Cambridge,Mass.) (2016)

Release Date

2016-11-30

Peptides

Hemagglutinin HA1: ACE
Hemagglutinin HA2: BDF
16.g.07 Heavy chain: GHJ
16.g.07 Light chain: IKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

B
B

D
D

F
F

G
G

H
H

J
J

I
I

K
K

L
L

Hemagglutinin HA1

Hemagglutinin HA2

16.g.07 Heavy chain

16.g.07 Light chain

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