SMTL ID : 5kd7.1

Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PV9) of HIV gp120 MN Isolate (IGPGRAFYV)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.35 Å
Oligo State
hetero-4-4-mer
Ligands
4 x ILE- GLY- PRO- GLY- ARG- ALA- PHE- TYR- VAL: Peptide (PV9) of HIV gp120 MN isolate (IGPGRAFYV)(Non-covalent)
7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Frey, B.F. et al., Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity. J. Immunol. (2018)
Peptides
H-2 class I histocompatibility antigen, D-D alpha chain: ACEG
Beta-2-microglobulin: BDFH
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
E
F
G
I
B
B
D
D
F
G
H
J

H-2 class I histocompatibility antigen, D-D alpha chain

Toggle Identical (AC)

Beta-2-microglobulin

Toggle Identical (DFH)

Related Entries With Identical Sequence

1qo3.1 | 1qo3.2 | 3dmm.1 | 3e6h.1 | 3ecb.1 | 4huu.1 | 4huu.2 | 4huw.1 | 4huw.2 | 4hv8.1 | 4hv8.2 | 4pg2.1 | 5ivx.1 | 5j6g.1 | 5j6g.2 | 5j6g.3 | 5j6h.1 | 5kd4.1 | 5kd4.2 | 5t7g.1 | 6a97.1