SMTL ID : 5kma.1

Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant nucleoside D-Trp phosphoramidate substrate complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

1 x 777: [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-ethyl-phosphonamidic acid(Non-covalent)

777.1: 17 residues within 4Å: Chain A: I.21, F.22, I.25, F.44, H.45, D.46, I.47, S.48, L.56, N.102, G.108, Q.109, S.110, V.111, N.115, H.117 Chain B: W.126 12 PLIP interactions: 11 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:H.45, A:I.47, A:S.48, A:S.48, A:N.102, A:S.110, A:S.110, A:V.111, A:N.115 Water bridges: A:S.48, A:N.102 Hydrophobic interactions: B:W.126

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain B: N.102, Q.109, S.110, N.115, H.117 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maize, K.M. et al., A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides. Mol. Pharm. (2017)

Release Date

2017-06-28

Peptides

Histidine triad nucleotide-binding protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histidine triad nucleotide-binding protein 1

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