SMTL ID : 5koe.4 (5 other biounits)

The structure of Arabidopsis thaliana FUT1 in complex with XXLG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 7 residues within 4Å: Chain A: Y.165, M.168, V.169, V.173, G.202, D.203, F.206 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.203 Water bridges: A:F.206, A:F.206 pi-Cation interactions: A:F.206

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.32, C.134, E.135 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: L.100, G.101, F.402 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: L.60, R.63 Ligand excluded by PLIP

1 x K: POTASSIUM ION(Non-covalent)

K.5: 3 residues within 4Å: Chain A: D.130, F.133, T.257 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.130, A:D.130, A:F.133, H2O.17, H2O.18

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 4 residues within 4Å: Chain A: D.314, L.316, E.318, P.352 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.314

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 3 residues within 4Å: Chain A: G.67, T.68, E.69 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Urbanowicz, B.R. et al., Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water-mediated mechanism. Plant J. (2017)

Release Date

2016-09-28

Peptides

Galactoside 2-alpha-L-fucosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Galactoside 2-alpha-L-fucosyltransferase

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