SMTL ID : 5l1b.1

AMPA subtype ionotropic glutamate receptor GluA2 in Apo state

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 4.00 Å

Oligo State

homo-tetramer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: Q.328, E.330, N.335, K.337, N.346 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.328, A:E.330, A:N.346 NAG.2: 3 residues within 4Å: Chain B: N.335, K.337, N.346 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.337 NAG.3: 4 residues within 4Å: Chain C: Q.328, N.335, K.337, N.346 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.328, C:N.346 NAG.4: 4 residues within 4Å: Chain D: Q.328, N.335, K.337, N.346 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:K.337 Hydrogen bonds: D:Q.328, D:N.346

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yelshanskaya, M.V. et al., Structural Bases of Noncompetitive Inhibition of AMPA-Subtype Ionotropic Glutamate Receptors by Antiepileptic Drugs. Neuron (2016)

Release Date

2016-10-19

Peptides

Glutamate receptor 2,Glutamate receptor 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Glutamate receptor 2,Glutamate receptor 2

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