SMTL ID : 5l8e.2 (1 other biounit)

Structure of UAF1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: R.50, T.317 Ligands: GOL.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.50, A:R.50, A:T.317 GOL.2: 4 residues within 4Å: Chain A: N.31, L.424, K.425 Ligands: GOL.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.31, A:N.31, A:R.50 Water bridges: A:G.32, A:G.427, A:G.427 GOL.3: 4 residues within 4Å: Chain A: K.168, R.193, K.202, K.205 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.168, A:R.193, A:R.193, A:K.202, A:K.202, A:K.205 GOL.4: 6 residues within 4Å: Chain A: H.73, K.100, R.114, F.526, R.527 Ligands: GOL.7 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.100, A:R.527, A:R.527 GOL.5: 4 residues within 4Å: Chain A: S.111, T.112, N.157 Ligands: GOL.7 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.112 GOL.6: 5 residues within 4Å: Chain A: K.318, S.319, G.360, S.362, T.380 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.318, A:S.319, A:S.362, A:S.362 Water bridges: A:S.362, A:S.362 GOL.7: 7 residues within 4Å: Chain A: H.73, C.109, M.110, S.111, T.112 Ligands: GOL.4, GOL.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:C.109, A:T.112, A:T.112 Water bridges: A:R.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dharadhar, S. et al., A conserved two-step binding for the UAF1 regulator to the USP12 deubiquitinating enzyme. J.Struct.Biol. (2016)

Release Date

2016-09-28

Peptides

WD repeat-containing protein 48: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

WD repeat-containing protein 48

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