SMTL ID : 5l9q.2 (1 other biounit)

OCEANOBACILLUS IHEYENSIS MACRODOMAIN WITH ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: G.38, D.39, I.40, A.51, G.61, V.62, A.65, S.151, I.152, S.153, T.154, G.155, V.156, Y.157, F.189, D.193 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:D.39, A:I.40, A:V.62, A:S.153, A:T.154, A:T.154, A:G.155, A:V.156, A:Y.157, A:D.193 Water bridges: A:S.151, A:F.189 pi-Stacking: A:F.189, A:F.189

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: S.190, E.191, R.192 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.190, A:E.191, A:R.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zapata-Perez, R. et al., Structural and functional analysis of Oceanobacillus iheyensis macrodomain reveals a network of waters involved in substrate binding and catalysis. Open Biol (2017)

Release Date

2017-05-03

Peptides

MACROD-TYPE MACRODOMAIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

MACROD-TYPE MACRODOMAIN

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