SMTL ID : 5lub.2 (1 other biounit)

Crystal structure of human legumain (AEP) in complex with compound 11

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: K.156, D.175, N.176, N.247, T.249 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.156

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.66 No protein-ligand interaction detected (PLIP)

1 x 3Y7: 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine(Non-covalent)

3Y7.3: 9 residues within 4Å: Chain A: R.19, H.20, N.122, H.123, E.162, C.164, S.191, A.193, D.206 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:A.193

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease. Nat Commun (2017)

Release Date

2017-03-29

Peptides

Legumain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Legumain

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