SMTL ID : 5m9m.1 (3 other biounits)

Human angiogenin PD variant Q77P

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: H.85, G.86, R.96 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.86 Water bridges: A:R.96, A:R.96, A:R.96 Salt bridges: A:H.85, A:R.96 SO4.2: 2 residues within 4Å: Chain A: R.33, R.34 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.33, A:R.34

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 4 residues within 4Å: Chain A: P.39, C.40, K.41, D.42 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.42 Water bridges: A:P.39, A:K.41

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain A: R.102, I.120 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.102, A:R.102 EDO.5: 4 residues within 4Å: Chain A: H.14, V.114, H.115, L.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.116, A:L.116

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.6: 4 residues within 4Å: Chain A: Y.15, N.50, K.51, R.52 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.15, A:N.50, A:K.51, A:R.52 Water bridges: A:K.51, A:K.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradshaw, W.J. et al., Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis. Sci Rep (2017)

Release Date

2017-02-22

Peptides

Angiogenin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Angiogenin

Related Entries With Identical Sequence