SMTL ID : 5m9m.3 (3 other biounits)

Human angiogenin PD variant Q77P

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.33, R.34 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.33, A:R.34 Salt bridges: A:R.33, A:R.34 SO4.2: 1 residues within 4Å: Chain A: K.18 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.18 SO4.3: 3 residues within 4Å: Chain A: N.50, K.51, R.52 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.51, A:R.52 Salt bridges: A:R.52 SO4.4: 2 residues within 4Å: Chain A: H.9, V.114 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.6, A:H.9, A:H.9, A:Q.13 Salt bridges: A:H.9

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 3 residues within 4Å: Chain A: S.29, R.32, R.33 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.29, A:R.32 EDO.6: 5 residues within 4Å: Chain A: H.115, L.116, D.117, Q.118, R.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.115, A:Q.118, A:R.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradshaw, W.J. et al., Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis. Sci Rep (2017)

Release Date

2017-02-22

Peptides

Angiogenin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Angiogenin

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