- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x NAG- NAG- NAG- NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)
C8E.4: 4 residues within 4Å:- Chain A: G.226, Q.240, Y.241, D.257
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:Y.241
C8E.5: 2 residues within 4Å:- Chain A: A.239, M.259
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.239
C8E.6: 4 residues within 4Å:- Chain A: L.263, M.264, Y.265, Y.272
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:Y.272, A:Y.272
C8E.11: 7 residues within 4Å:- Chain B: L.201, V.225, G.226, A.239, Q.240, M.259
- Ligands: C8E.12
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:A.239
C8E.12: 4 residues within 4Å:- Chain B: L.196, G.197, L.199
- Ligands: C8E.11
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:L.199
C8E.16: 6 residues within 4Å:- Chain C: L.199, G.226, V.227, A.239, Q.240, M.259
1 PLIP interactions:1 interactions with chain C- Hydrophobic interactions: C:L.199
- 9 x NA: SODIUM ION(Non-functional Binders)
NA.7: 4 residues within 4Å:- Chain A: D.45, N.46, G.48
- Chain C: G.183
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.48
NA.8: 3 residues within 4Å:- Chain A: D.83, P.84, G.87
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.83, A:G.87
NA.9: 3 residues within 4Å:- Chain A: Q.148, Q.151, D.176
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.151, A:D.176
NA.10: 4 residues within 4Å:- Chain A: G.183
- Chain B: D.45, N.46, G.48
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.46
NA.13: 3 residues within 4Å:- Chain B: Q.148, Q.151, D.176
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.151, B:Q.151
NA.14: 3 residues within 4Å:- Chain B: D.83, P.84, G.87
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.87
NA.15: 4 residues within 4Å:- Chain B: G.183
- Chain C: D.45, N.46, G.48
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.46
NA.17: 3 residues within 4Å:- Chain C: Q.148, Q.151, D.176
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.151, C:Q.151
NA.18: 3 residues within 4Å:- Chain C: D.83, P.84, G.87
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:G.87, C:G.87
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Aunkham, A. et al., Structural basis for chitin acquisition by marine Vibrio species. Nat Commun (2018)
- Release Date
- 2017-12-20
- Peptides
- Chitoporin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x NAG- NAG- NAG- NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)
- 9 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Aunkham, A. et al., Structural basis for chitin acquisition by marine Vibrio species. Nat Commun (2018)
- Release Date
- 2017-12-20
- Peptides
- Chitoporin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F - Membrane
-
We predict this structure to be a membrane protein.