SMTL ID : 5moy.1

Crystal structure of the BoNT/A2 receptor-binding domain in complex with the luminal domain of its neuronal receptor SV2C

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: Y.133, S.134, V.137, I.139, S.140, D.141, Y.142 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.134, A:D.141

1 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.2: 13 residues within 4Å: Chain A: W.78, D.141, R.145, W.146, K.202, Y.203, Q.223, S.224, N.225, K.230, F.232, W.233, G.234 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benoit, R.M. et al., Crystal structure of the BoNT/A2 receptor-binding domain in complex with the luminal domain of its neuronal receptor SV2C. Sci Rep (2017)

Release Date

2017-03-15

Peptides

Botulinum neurotoxin type A: A
Synaptic vesicle glycoprotein 2C: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Botulinum neurotoxin type A

Synaptic vesicle glycoprotein 2C

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