SMTL ID : 5myb.1

Homodimerization of Tie2 Fibronectin-like domains 2 and 3 in space group P21

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 5 residues within 4Å: Chain A: K.135, N.141, T.143, S.180, L.182 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 4 residues within 4Å: Chain B: N.141, T.143, S.180, L.182 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 1 residues within 4Å: Chain A: N.177 No protein-ligand interaction detected (PLIP) NAG.4: 1 residues within 4Å: Chain A: N.230 No protein-ligand interaction detected (PLIP) NAG.5: 1 residues within 4Å: Chain B: N.177 No protein-ligand interaction detected (PLIP) NAG.6: 3 residues within 4Å: Chain B: N.230, S.235, Q.279 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.235, B:S.235, B:Q.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leppanen, V.M. et al., Structural basis of Tie2 activation and Tie2/Tie1 heterodimerization. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-04-26

Peptides

Angiopoietin-1 receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Angiopoietin-1 receptor

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