SMTL ID : 5n0c.2 (1 other biounit)

Crystal structure of the tetanus neurotoxin in complex with GM1a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x BGC- GAL- NGA- GAL- SIA: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose

BGC-GAL-NGA-GAL-SIA.1: 9 residues within 4Å: Chain A: N.1239, L.1241, D.1242, T.1290, H.1291, I.1305, S.1307, W.1309, Y.1310 3 PLIP interactions: 3 interactions with chain A Water bridges: A:T.1290, A:Y.1310, A:N.1312, A:N.1312, A:N.1312 Hydrogen bonds: A:N.1239, A:H.1291, A:S.1307

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: H.253, H.257 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.253, A:H.257, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Masuyer, G. et al., The structure of the tetanus toxin reveals pH-mediated domain dynamics. EMBO Rep. (2017)

Release Date

2017-06-21

Peptides

Tetanus toxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tetanus toxin

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