SMTL ID : 5n9x.2 (1 other biounit)

Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, ligand bound structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x 8QN: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{S},3~{R})-2-azanyl-3-oxidanyl-butanoate(Non-covalent)

8QN.1: 21 residues within 4Å: Chain A: T.167, D.212, F.213, G.284, G.285, E.286, K.287, N.309, M.310, Y.311, G.312, I.313, T.314, E.315, V.318, I.337, D.406, Y.418, R.421, N.513, K.515 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:F.213 Hydrogen bonds: A:T.167, A:G.285, A:N.309, A:M.310, A:G.312, A:G.312, A:I.313, A:T.314, A:T.314, A:D.406, A:Y.418, A:R.421, A:R.421, A:N.513, A:K.515 Water bridges: A:S.404 Salt bridges: A:K.515, A:K.515 pi-Stacking: A:Y.311, A:Y.311, A:Y.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scaglione, A. et al., Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity. FEBS J. (2017)

Release Date

2017-07-26

Peptides

Adenylation domain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Adenylation domain

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