SMTL ID : 5nkm.1 (2 other biounits)

SMG8-SMG9 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: I.232, D.233, C.234, G.235, S.238, C.240, Q.241, L.242 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.233, A:D.233, A:C.234, A:S.238, A:L.242, A:L.242 EDO.2: 6 residues within 4Å: Chain A: K.141, L.228, Y.229 Chain B: D.114, D.115, S.116 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:K.141, B:D.115 Water bridges: B:D.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, L. et al., Structure of a SMG8-SMG9 complex identifies a G-domain heterodimer in the NMD effector proteins. RNA (2017)

Release Date

2017-04-19

Peptides

Protein smg-8: A
Protein smg-9: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein smg-8

Protein smg-9

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