SMTL ID : 5nqz.2 (1 other biounit)

Structure of a fHbp(V1.1):PorA(P1.16) chimera. Fusion at fHbp position 309.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.195, H.199 Ligands: ACT.5, ACT.6 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Ligand interactions Metal complexes: A:D.195, A:H.199, ACT.5, ACT.6 ZN.2: 2 residues within 4Å: Chain A: E.112 Ligands: ACT.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:E.112, A:E.112, ACT.4 ZN.3: 2 residues within 4Å: Chain A: H.265, H.267 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.265, A:H.267

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 2 residues within 4Å: Chain A: E.112 Ligands: ZN.2 No protein-ligand interaction detected (PLIP) ACT.5: 5 residues within 4Å: Chain A: D.195, K.197, H.199 Ligands: ZN.1, ACT.6 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:K.197 Water bridges: A:K.197 Salt bridges: A:H.199 ACT.6: 5 residues within 4Å: Chain A: H.132, D.195, H.199 Ligands: ZN.1, ACT.5 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.132, A:H.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hollingshead, S. et al., Structure-based design of chimeric antigens for multivalent protein vaccines. Nat Commun (2018)

Release Date

2018-02-28

Peptides

Factor H binding protein,Major outer membrane protein P.IA,Factor H binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Factor H binding protein,Major outer membrane protein P.IA,Factor H binding protein

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